Whole Wheat Pumpkin Bread with Cream Cheese Filling Recipe
Introduction
This Whole Wheat Pumpkin Bread with Cream Cheese Filling is a moist, flavorful treat perfect for fall or any time you crave cozy spices. The rich cream cheese center adds a delightful surprise to each slice, making it a crowd-pleaser for breakfast or dessert.

Ingredients
- 6 ounces Cream Cheese
- 2 tablespoons Coconut Sugar
- 1 tablespoon Almond Milk
- 2 Organic Eggs
- 1/2 cup Coconut Sugar
- 1/4 cup Maple Syrup
- 3/4 cup Pumpkin Purée
- 1/4 cup Nonfat Plain Greek Yogurt
- 1 teaspoon Vanilla Extract
- 1/4 cup Oats
- 1 cup Whole Wheat Flour
- 1 teaspoon Baking Soda
- 1/4 teaspoon Baking Powder
- 1 1/2 teaspoons Pumpkin Pie Spice
- 1 teaspoon Ground Cinnamon
- 1/4 teaspoon Ground Nutmeg
- 1/4 teaspoon Ground Cloves
- 1/4 teaspoon Sea Salt
- 1/3 cup Yogurt Baking Chips
- 2 tablespoons Chopped Pecans
Instructions
- Step 1: Preheat your oven to 350 degrees F (180 degrees C). Lightly grease and flour a 9×5-inch loaf pan to prevent sticking.
- Step 2: In a small bowl, beat together the cream cheese, 2 tablespoons coconut sugar, and almond milk until smooth and creamy.
- Step 3: In a large mixing bowl, beat the eggs and 1/2 cup coconut sugar until lightly mixed. Then whisk in the maple syrup, pumpkin purée, Greek yogurt, and vanilla extract until fully combined.
- Step 4: In a separate medium bowl, combine the whole wheat flour, oats, baking soda, baking powder, pumpkin pie spice, cinnamon, nutmeg, cloves, and sea salt. Mix until evenly blended.
- Step 5: Gradually add the dry ingredients to the wet ingredients, stirring just until combined. Fold in the yogurt baking chips evenly.
- Step 6: Pour half of the batter into the prepared loaf pan. Spoon the cream cheese filling evenly over the batter, then spread gently. Pour the remaining batter over the cream cheese layer, covering it completely.
- Step 7: Sprinkle the remaining yogurt baking chips and chopped pecans on top. Bake for 45 to 50 minutes, or until a toothpick inserted into the center comes out clean.
- Step 8: Remove from the oven and let the bread cool in the pan for 20 to 25 minutes before carefully removing to a wire rack or plate.
- Step 9: Once cooled, wrap the bread firmly in aluminum foil and refrigerate until ready to serve.
Tips & Variations
- For a dairy-free version, substitute the cream cheese and Greek yogurt with vegan alternatives.
- Add walnuts or chocolate chips instead of pecans for a different crunch.
- If you prefer a sweeter bread, increase the maple syrup slightly or drizzle honey on top after baking.
- Let the bread come to room temperature before serving for best flavor and texture.
Storage
Store the pumpkin bread wrapped tightly in aluminum foil or an airtight container in the refrigerator for up to one week. Reheat slices gently in a microwave or oven before serving to refresh the texture and flavor.
How to Serve

Serve this delicious recipe with your favorite sides.
FAQs
Can I use canned pumpkin instead of fresh pumpkin purée?
Yes, canned pumpkin purée works perfectly and is a convenient option that provides consistent moisture and flavor.
Can I freeze this pumpkin bread?
Absolutely. Wrap the fully cooled bread tightly in plastic wrap and then aluminum foil or place it in a freezer-safe bag. Freeze for up to three months. Thaw overnight in the refrigerator before serving.
Print
Whole Wheat Pumpkin Bread with Cream Cheese Filling Recipe
- Total Time: 1 hour 10 minutes
- Yield: 1 loaf (about 10–12 servings) 1x
- Diet: Vegetarian
Description
This wholesome Whole Wheat Pumpkin Bread with Cream Cheese Filling is a moist and flavorful loaf perfect for autumn or any time you crave a cozy treat. Made with nutrient-rich whole wheat flour, warm pumpkin pie spices, and a luscious cream cheese filling, this bread balances natural sweetness from coconut sugar and maple syrup. Topped with yogurt baking chips and chopped pecans, it delivers a delightful texture contrast and a rich taste. Ideal for breakfast, snack, or dessert, this recipe bakes up beautifully in a loaf pan, creating a festive centerpiece for your table.
Ingredients
Cream Cheese Filling
- 6 ounces Cream Cheese
- 2 tablespoons Coconut Sugar
- 1 tablespoon Almond Milk
Bread Batter
- 2 Organic Eggs
- 1/2 cup Coconut Sugar
- 1/4 cup Maple Syrup
- 3/4 cup Pumpkin Purée
- 1/4 cup Nonfat Plain Greek Yogurt
- 1 teaspoon Vanilla Extract
- 1/4 cup Oats
- 1 cup Whole Wheat Flour
- 1 teaspoon Baking Soda
- 1/4 teaspoon Baking Powder
- 1 1/2 teaspoons Pumpkin Pie Spice
- 1 teaspoon Ground Cinnamon
- 1/4 teaspoon Ground Nutmeg
- 1/4 teaspoon Ground Cloves
- 1/4 teaspoon Sea Salt
- 1/3 cup Yogurt Baking Chips
- 2 tablespoons Chopped Pecans
Instructions
- Preheat and Prepare Pan: Preheat your oven to 350 degrees F (180 degrees C). Lightly grease and flour a 9×5-inch loaf pan to prevent sticking and ensure easy removal.
- Make Cream Cheese Filling: In a small bowl, beat together 6 ounces of cream cheese, 2 tablespoons of coconut sugar, and 1 tablespoon of almond milk until the mixture is smooth and creamy. Set aside.
- Combine Wet Ingredients: In a large mixing bowl, beat 2 organic eggs with 1/2 cup coconut sugar until lightly mixed. Add 1/4 cup maple syrup, 3/4 cup pumpkin purée, 1/4 cup nonfat plain Greek yogurt, and 1 teaspoon vanilla extract, whisking to combine thoroughly.
- Mix Dry Ingredients: In a separate medium bowl, stir together 1 cup whole wheat flour, 1/4 cup oats, 1 teaspoon baking soda, 1/4 teaspoon baking powder, 1 1/2 teaspoons pumpkin pie spice, 1 teaspoon ground cinnamon, 1/4 teaspoon ground nutmeg, 1/4 teaspoon ground cloves, and 1/4 teaspoon sea salt until evenly combined.
- Combine Wet and Dry Ingredients: Slowly add the dry ingredient mixture into the wet ingredients. Stir gently just until combined, being careful not to overmix. Fold in 1/3 cup yogurt baking chips.
- Layer Batter and Filling: Pour half of the batter into the prepared loaf pan. Spoon the cream cheese filling evenly over the batter layer. Carefully spread the remaining batter over the filling to completely cover it.
- Add Toppings and Bake: Sprinkle remaining yogurt baking chips and 2 tablespoons chopped pecans on top. Place the pan in the preheated oven and bake for 45-50 minutes, or until a toothpick inserted in the center comes out clean.
- Cool the Bread: Remove the loaf from the oven and allow it to cool in the pan for 20-25 minutes. This helps the bread set and makes it easier to remove from the pan.
- Store Properly: Once completely cooled, remove the bread from the pan and wrap it tightly in aluminum foil. Refrigerate until ready to serve. The bread will keep for up to one week in the refrigerator. Enjoy!
Notes
- Use organic eggs for best flavor and quality.
- Almond milk can be substituted with any plant-based milk if preferred.
- Do not overmix the batter to keep the bread tender and moist.
- If you do not have yogurt baking chips, white chocolate chips can be used as an alternative.
- Ensure the cream cheese filling is smooth to create an even filling layer.
- Allow the bread to cool completely before wrapping to prevent sogginess.
- Store the bread in the refrigerator to maintain freshness longer.
- Prep Time: 20 minutes
- Cook Time: 50 minutes
- Category: Bread
- Method: Baking
- Cuisine: American
Keywords: whole wheat pumpkin bread, cream cheese filling, pumpkin bread recipe, healthy pumpkin bread, fall baking, yogurt baking chips, pecan pumpkin bread

